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PDBsum entry 1j5e
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Tunnel analysis for: 1j5e calculated with  MOLE 2.0
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PDB id
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1j5e
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.20 |
1.20 |
135.7 |
-1.34 |
-0.73 |
14.0 |
77 |
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9 |
2 |
2 |
0 |
0 |
2 |
0 |
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C 934 A G 951 A A 968 A C 970 A G 971 A C 972 A G
973 A A 974 A A 975 A A 977 A A 978 A U 1062 A U
1065 A G 1175 A A 1176 A G 1178 A G 1181 A A 1183
A G 1184 A G 1185 A G 1186 A G 1187 A G 1190 A U
1232 A A 1319 A C 1320 A C 1321 A C 1322 A G 1323
A A 1346 A G 1361 A C 1362 A A 1363 A G 1365 A C
1366 A C 1367 A UNX 1618 A UNX 1663 A
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2 |
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1.14 |
1.57 |
18.8 |
1.21 |
0.44 |
4.8 |
61 |
1 |
0 |
0 |
6 |
1 |
0 |
0 |
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3 |
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1.14 |
1.67 |
28.7 |
1.12 |
0.54 |
6.7 |
65 |
1 |
1 |
1 |
6 |
1 |
0 |
0 |
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4 |
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1.50 |
3.44 |
19.2 |
2.12 |
0.57 |
8.0 |
76 |
1 |
3 |
0 |
8 |
0 |
0 |
0 |
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5 |
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1.13 |
2.56 |
18.3 |
1.37 |
0.27 |
7.0 |
84 |
1 |
1 |
0 |
8 |
0 |
1 |
0 |
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6 |
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1.54 |
3.30 |
15.7 |
-1.18 |
-0.11 |
13.3 |
78 |
2 |
1 |
1 |
2 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program