PDBsum entry 1j07 Go to PDB code:  Tunnel analysis for: 1j07 calculated with MOLE 2.0 PDB id 1j07 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.13 33.9 0.11 0.44 2.6 60 1 0 1 3 9 0 0  CO3 904 B DCU 952 B 2 1.15 1.15 16.1 -1.58 -0.49 6.3 78 0 2 3 0 2 0 0   3 1.32 1.36 17.6 -0.50 -0.37 7.1 93 2 0 2 3 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.