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PDBsum entry 1is7

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1is7 calculated with MOLE 2.0 PDB id
1is7
Pores calculated on whole structure Pores calculated excluding ligands

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31 pores, coloured by radius 31 pores, coloured by radius 31 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.63 2.88 72.8 -1.45 -0.70 14.1 88 10 4 8 4 0 2 0  PHE 1002 R
2 1.54 2.48 72.9 -0.66 -0.18 16.0 79 3 3 5 7 1 0 2  
3 1.66 1.77 77.5 -1.28 -0.66 10.8 91 7 3 11 3 0 3 0  PHE 1005 T
4 1.71 1.72 81.2 -2.32 -0.55 21.9 79 13 6 7 6 1 4 0  PHE 1002 R
5 1.17 1.16 117.6 -2.03 -0.68 21.3 92 16 8 18 3 2 0 0  
6 1.65 1.66 119.1 -1.46 -0.65 14.4 86 11 5 12 6 3 2 0  
7 1.69 2.96 126.4 -1.23 -0.57 16.6 85 14 7 11 9 1 2 2  PHE 1009 K
8 1.62 2.87 127.3 -1.42 -0.56 17.7 86 18 6 11 8 1 1 2  PHE 1004 S
9 1.59 1.81 130.9 -1.87 -0.36 27.4 80 13 9 7 7 2 0 2  
10 1.67 2.86 144.1 -1.96 -0.74 21.4 95 20 10 20 0 0 0 0  
11 0.87 1.19 143.8 -2.17 -0.48 23.1 80 17 8 13 9 3 5 0  
12 0.87 1.16 144.4 -2.22 -0.49 23.1 80 17 8 12 9 3 5 0  PHE 1010 L
13 1.71 2.83 143.9 -1.55 -0.66 16.2 87 17 7 12 7 1 2 0  PHE 1005 T
14 0.87 1.16 145.9 -1.87 -0.43 23.3 81 18 10 10 12 1 4 2  PHE 1009 K PHE 1010 L
15 1.19 2.11 159.2 -2.09 -0.66 24.1 90 20 13 19 5 1 1 0  PHE 1001 R
16 0.87 1.19 155.6 -2.29 -0.67 25.2 91 20 13 19 3 0 3 0  
17 0.87 1.16 157.7 -2.35 -0.67 25.7 91 20 14 19 3 0 3 0  
18 1.83 2.14 157.8 -2.33 -0.67 25.9 91 20 12 19 3 0 3 0  
19 1.21 2.86 161.4 -1.08 -0.16 18.4 79 9 7 7 10 4 1 0  
20 0.87 1.19 169.2 -2.78 -0.57 31.3 88 20 15 18 6 0 6 0  
21 1.22 1.34 173.3 -2.50 -0.57 27.2 85 20 14 18 9 5 2 0  
22 1.55 1.77 168.4 -2.05 -0.41 27.7 80 17 9 9 8 4 0 2  
23 1.74 2.81 181.8 -1.29 -0.54 11.9 84 13 6 13 6 4 2 0  PHE 1003 P
24 1.64 1.64 186.0 -2.17 -0.51 22.4 79 18 12 12 10 6 4 0  PHE 1008 O
25 1.64 1.88 194.9 -2.05 -0.37 26.2 81 17 9 11 9 4 1 2  
26 1.63 2.72 203.8 -2.36 -0.66 26.4 88 24 17 20 4 3 2 0  
27 1.71 1.80 201.0 -1.89 -0.38 17.7 80 16 9 12 9 4 5 0  PHE 1003 P PHE 1005 T
28 1.74 1.98 207.1 -2.79 -0.58 32.8 84 26 19 16 10 3 4 0  
29 1.64 3.07 235.9 -1.76 -0.44 22.5 79 23 13 14 18 4 4 2  PHE 1009 K PHE 1008 O
30 1.78 2.77 246.6 -2.28 -0.64 25.5 87 25 17 23 9 3 2 0  
31 1.34 1.41 49.4 1.03 0.68 4.2 66 1 2 0 12 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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