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PDBsum entry 1is2

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1is2 calculated with MOLE 2.0 PDB id
1is2
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.71 2.90 34.1 0.31 -0.04 4.5 74 0 1 2 6 3 2 0  
2 1.89 1.89 46.5 -1.10 -0.16 14.0 80 6 2 5 4 5 1 0  
3 1.31 2.76 54.2 -0.45 0.15 15.6 83 5 4 6 6 3 0 0  FAD 699 A
4 1.65 1.92 56.0 -1.05 -0.28 14.6 79 4 3 6 9 6 0 0  
5 1.23 1.32 63.0 -0.61 0.08 18.1 81 6 5 5 9 3 0 0  FAD 1699 B
6 1.64 1.90 63.9 -0.91 -0.17 13.9 83 6 2 7 6 4 2 0  
7 1.32 2.80 103.4 -0.73 0.02 16.8 76 8 6 4 9 6 2 1  FAD 699 A
8 1.32 1.47 106.1 -1.66 -0.21 22.4 77 8 8 8 11 8 0 0  FAD 699 A FAD 1699 B
9 1.68 1.92 115.3 -1.06 -0.37 18.2 87 8 8 9 11 0 1 0  
10 1.19 1.30 121.3 -0.80 -0.14 15.2 82 12 8 8 12 7 1 0  FAD 1699 B
11 1.25 3.05 123.7 -1.08 -0.15 16.6 76 8 10 6 11 9 3 1  FAD 699 A
12 1.18 1.30 122.0 -0.95 -0.11 16.5 73 8 9 6 12 11 3 1  FAD 699 A FAD 1699 B
13 1.56 1.63 148.2 -1.08 -0.21 14.8 75 12 10 8 14 15 2 1  FAD 699 A FAD 1699 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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