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PDBsum entry 1ipe

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1ipe calculated with MOLE 2.0 PDB id
1ipe
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 1.73 33.1 1.65 0.45 7.3 76 1 1 2 10 2 0 1  
2 1.77 1.91 33.3 0.64 0.34 8.1 79 2 1 3 6 2 2 0  NDP 261 A
3 1.67 1.87 37.4 0.64 0.26 9.2 81 4 1 4 10 2 2 0  NDP 262 B
4 1.41 2.80 39.6 1.38 0.43 6.0 79 1 1 4 10 2 1 1  NDP 261 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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