PDBsum entry 1ioi Go to PDB code:  Tunnel analysis for: 1ioi calculated with MOLE 2.0 PDB id 1ioi Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 2.27 24.1 2.17 0.67 4.9 90 1 1 2 8 2 0 0   2 1.17 2.49 24.5 1.93 0.65 5.9 93 1 1 2 8 1 0 0   3 1.22 2.66 24.9 2.30 0.69 4.4 91 1 1 1 8 1 0 0   4 1.30 2.23 25.5 2.37 0.78 4.9 88 1 1 1 8 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.