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PDBsum entry 1im3

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1im3 calculated with MOLE 2.0 PDB id
1im3
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.50 2.03 26.7 -2.39 -0.46 27.9 77 5 4 1 1 1 1 0  
2 2.30 2.60 63.3 -1.74 -0.37 22.2 80 5 7 3 4 5 2 0  
3 1.18 2.28 105.5 -2.20 -0.51 27.3 79 8 11 3 3 6 2 0  
4 1.24 1.01 142.2 -1.71 -0.49 22.8 82 10 13 7 6 7 3 0  
5 3.10 3.10 30.3 -2.03 -0.40 19.9 77 3 2 2 0 1 2 0  
6 1.93 3.40 43.3 -1.69 -0.34 27.0 81 6 5 1 6 1 1 0  
7 1.94 2.00 62.7 -1.59 -0.45 18.3 77 4 7 3 3 5 3 0  
8 2.30 2.56 63.3 -1.65 -0.22 22.7 77 5 6 2 4 5 2 0  
9 1.93 3.74 29.4 -1.55 -0.30 13.3 85 3 2 4 4 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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