spacer
spacer

PDBsum entry 1if3

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 1if3 calculated with MOLE 2.0 PDB id
1if3
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.24 45.1 -1.42 -0.01 12.8 81 1 1 2 2 1 0 0  
2 1.18 1.25 45.2 -1.42 -0.01 12.8 81 1 1 2 2 1 0 0  
3 1.58 3.23 97.3 -1.60 -0.10 22.9 80 5 4 5 6 4 0 0  
4 1.58 3.23 97.3 -1.60 -0.10 22.9 80 5 4 5 6 4 0 0  
5 1.40 1.45 142.1 -1.61 -0.12 19.5 80 8 5 9 10 5 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer