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PDBsum entry 1ibv
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Tunnel analysis for: 1ibv calculated with  MOLE 2.0
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PDB id
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1ibv
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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11 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.42 |
1.62 |
16.6 |
-1.13 |
-0.72 |
13.2 |
97 |
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0 |
3 |
4 |
2 |
0 |
0 |
0 |
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2 |
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1.36 |
1.56 |
21.4 |
-1.62 |
-0.75 |
20.1 |
91 |
2 |
4 |
3 |
2 |
0 |
0 |
0 |
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3 |
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1.29 |
1.47 |
16.6 |
-1.19 |
-0.74 |
13.3 |
97 |
0 |
3 |
4 |
2 |
0 |
0 |
0 |
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4 |
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1.45 |
1.68 |
18.3 |
-1.30 |
-0.75 |
16.5 |
93 |
1 |
3 |
3 |
2 |
0 |
0 |
0 |
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5 |
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1.10 |
1.33 |
20.4 |
-1.51 |
0.01 |
12.9 |
71 |
2 |
1 |
1 |
1 |
2 |
2 |
0 |
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6 |
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1.21 |
1.21 |
19.1 |
-0.63 |
-0.34 |
8.9 |
73 |
1 |
2 |
1 |
2 |
2 |
2 |
0 |
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7 |
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1.24 |
1.24 |
22.3 |
-0.70 |
-0.31 |
10.8 |
73 |
2 |
2 |
2 |
2 |
3 |
2 |
0 |
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8 |
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1.22 |
1.22 |
22.3 |
-0.86 |
-0.29 |
11.9 |
73 |
2 |
2 |
2 |
2 |
3 |
2 |
0 |
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9 |
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1.10 |
1.10 |
16.1 |
0.29 |
-0.21 |
7.5 |
83 |
0 |
2 |
2 |
5 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program