PDBsum entry 1ibm

Ribosome

PDB id: 1ibm

DNA/RNA chain(s) highlighted

(click to view)

Contents

Protein chains

234 a.a. *

206 a.a. *

208 a.a. *

150 a.a. *

101 a.a. *

155 a.a. *

138 a.a. *

127 a.a. *

98 a.a. *

119 a.a. *

124 a.a. *

118 a.a. *

60 a.a. *

88 a.a. *

83 a.a. *

104 a.a. *

73 a.a. *

87 a.a. *

99 a.a. *

24 a.a. *

DNA/RNA

Metals

_MG ×120

_ZN ×2

* Residue conservation analysis

Nucleic acid sequences

Chain (1507 bases)

Sequence:

U-G-G-A-G-A-G-U-U-U-G-A-U-C-C-U-G-G-C-U-C-A-G-G-G-U-G-A-A-C-G-C-U-G-G-C-G-G-C-
-G-G-C-C-A-C-A-G-G-G-G-C-A-C-U-G-A-G-A-C-A-C-G-G-G-C-C-C-C-A-C-U-C-C-U-A-C-G-G-
-C-A-A-C-C-G-U-G-G-G-G-G-A-G-C-G-U-G-G-G-A-U-A-C-G-C-U-C-A-G-G-C-U-A-G-A-C-G-G-
-G-G-G-G-G-C-C-C-G-C-A-C-A-A-G-C-G-G-U-G-G-A-G-C-A-U-G-U-G-G-U-U-U-A-A-U-U-C-G-
-G-G-G-C-G-A-C-A-C-A-C-G-U-G-C-U-A-C-A-A-U-G-C-C-C-A-C-U-A-C-A-A-A-G-C-G-A-U-G-
-G-C-G-G-C-U-G-G-A-U-C-A

Chain (6 bases)

• Sequence: C-U-U-U-C-U

Chain (11 bases)

• Sequence: G-A-U-U-G-A-A-A-A-U-C

Chain (4 bases)

• Sequence: U-U-U-U

NUCPLOT - Plot of protein-DNA interactions (PostScript file)

PDF version