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PDBsum entry 1i6h

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Top Page protein dna_rna metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1i6h calculated with MOLE 2.0 PDB id
1i6h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.15 2.11 92.8 -0.85 -0.45 14.8 84 7 3 5 6 1 2 1  DA 3 D DT 4 D DC 6 D DC 7 D DG 9 D DG 10 D DG 1 R
DA 2 R DC 3 R DC 4 R DA 9 R
2 1.19 2.74 124.0 -0.59 -0.37 10.5 84 5 4 5 8 3 2 1  DA 3 D DT 4 D DT 13 D DA 2 R DC 3 R DC 4 R DA 9 R
3 1.22 1.85 15.1 2.48 0.97 4.8 83 1 0 0 5 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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