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PDBsum entry 1i4d
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Tunnel analysis for: 1i4d calculated with  MOLE 2.0
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PDB id
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1i4d
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
2.23 |
17.1 |
-1.82 |
-0.11 |
13.7 |
76 |
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2 |
1 |
3 |
1 |
2 |
0 |
0 |
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2 |
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1.18 |
2.17 |
27.9 |
-1.36 |
-0.21 |
10.4 |
80 |
2 |
0 |
5 |
3 |
2 |
0 |
0 |
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3 |
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1.31 |
2.23 |
16.6 |
-0.40 |
0.00 |
20.2 |
71 |
1 |
1 |
0 |
4 |
0 |
1 |
0 |
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4 |
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1.52 |
1.52 |
19.2 |
0.09 |
-0.20 |
3.6 |
90 |
0 |
1 |
3 |
3 |
1 |
0 |
0 |
GDP 200 D MG 201 D
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5 |
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1.32 |
1.88 |
15.6 |
-0.41 |
-0.19 |
18.5 |
70 |
2 |
1 |
1 |
4 |
0 |
0 |
0 |
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6 |
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1.33 |
1.84 |
21.4 |
-0.33 |
-0.04 |
20.8 |
71 |
2 |
3 |
0 |
5 |
0 |
0 |
0 |
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7 |
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1.35 |
1.35 |
31.3 |
-2.62 |
-0.26 |
36.8 |
70 |
2 |
4 |
0 |
2 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program