PDBsum entry 1hv4

Pore analysis for: 1hv4 calculated with

MOLE 2.0

PDB id

1hv4

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

19 pores, coloured by radius

15 pores, coloured by radius

15 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.46

1.45

42.0

-1.32

-0.12

19.3

76

5

1

3

2

3

1

0

HEM 157 G

2

1.52

1.77

44.2

0.61

0.14

9.8

74

5

0

0

11

1

1

2

HEM 153 C

3

1.56

1.78

44.4

0.71

0.17

9.4

74

6

0

0

11

1

1

2

HEM 155 E

4

1.83

5.52

48.9

-1.47

-0.34

23.9

76

5

3

1

2

1

2

2

5

1.78

5.50

49.2

-1.35

-0.33

22.6

76

5

3

1

2

1

2

2

6

1.78

5.49

49.2

-1.37

-0.32

23.1

76

5

3

1

2

1

2

2

7

1.54

1.77

49.6

0.83

0.13

7.5

75

5

0

0

10

1

1

2

HEM 151 A

8

1.55

1.78

53.6

0.83

0.18

8.3

74

5

0

0

11

1

1

2

HEM 157 G

9

1.49

1.75

67.8

-0.86

-0.06

21.3

71

11

4

1

9

2

3

3

HEM 157 G

10

1.25

1.36

68.0

-1.11

-0.04

22.0

81

12

4

2

9

3

2

0

HEM 156 F

11

1.26

1.37

73.1

-0.93

-0.08

20.6

78

12

3

2

7

3

2

1

HEM 156 F

12

1.69

5.04

94.7

-2.29

-0.49

28.8

79

13

10

2

3

1

4

2

13

1.98

5.03

137.7

-1.96

-0.38

27.1

79

18

9

2

2

2

4

3

14

2.06

2.06

186.3

-2.47

-0.41

31.8

82

22

8

2

1

1

4

0

15

1.41

1.38

228.6

-1.88

-0.29

28.5

81

27

15

4

9

4

5

0

HEM 156 F

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.