PDBsum entry 1hq4

Tunnel analysis for: 1hq4 calculated with

MOLE 2.0

PDB id

1hq4

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

6 tunnels, coloured by tunnel radius

6 tunnels, coloured by tunnel radius

6 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.14

2.89

24.4

0.40

0.77

1.5

59

0

0

1

4

7

1

0

2

1.17

1.26

17.8

-0.48

-0.44

6.1

78

1

2

3

3

1

1

0

3

1.17

1.26

40.1

-0.39

-0.26

9.6

71

1

2

3

4

3

1

1

4

1.18

1.27

53.2

-0.29

-0.19

9.4

78

2

1

4

5

3

1

1

5

1.15

2.93

28.0

0.22

0.62

2.6

62

1

0

2

4

8

1

0

6

1.15

2.93

28.6

0.22

0.73

3.7

61

1

0

1

4

7

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.