PDBsum entry 1hm2 Go to PDB code:  Tunnel analysis for: 1hm2 calculated with MOLE 2.0 PDB id 1hm2 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.34 15.6 -1.24 -0.51 20.2 80 2 1 1 1 0 0 0   2 1.35 1.35 15.9 -0.96 -0.55 16.2 86 2 1 2 1 0 0 0   3 1.36 1.76 16.6 -1.54 -0.33 24.5 80 3 1 1 1 1 0 0   4 1.34 1.76 16.9 -1.42 -0.39 21.5 84 3 1 2 1 1 0 0   5 1.12 1.76 16.2 -1.33 -0.41 13.5 81 2 1 1 2 0 1 0   6 1.06 1.06 16.2 -0.63 -0.56 6.2 76 1 1 2 1 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.