PDBsum entry 1hk5 Go to PDB code:  Tunnel analysis for: 1hk5 calculated with MOLE 2.0 PDB id 1hk5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.37 26.3 0.93 0.38 9.4 72 3 1 2 4 3 0 0   2 1.23 1.38 34.6 -0.71 0.03 13.9 68 4 2 2 2 4 0 1   3 1.26 1.42 35.4 1.24 0.42 9.8 74 5 3 1 9 2 1 0  MYR 1002 A 4 1.24 1.36 59.5 -1.43 -0.20 20.6 73 10 6 4 3 5 0 2  T44 1008 A 5 1.31 1.48 85.6 -0.70 0.00 15.9 76 12 4 8 11 6 1 2  MYR 1003 A MYR 1004 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.