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PDBsum entry 1h7w

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Pore analysis for: 1h7w calculated with MOLE 2.0 PDB id
1h7w
Pores calculated on whole structure Pores calculated excluding ligands

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25 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.70 2.60 41.2 -0.44 0.15 20.4 67 8 3 0 6 4 2 0  
2 1.70 1.90 41.3 -2.31 -0.39 23.3 73 8 1 1 0 2 0 0  
3 2.27 2.47 41.7 -1.97 -0.35 27.2 73 4 6 3 3 1 4 0  
4 1.74 1.86 73.7 -1.10 -0.30 15.0 85 5 4 8 10 3 3 0  
5 1.82 1.77 76.0 -2.08 -0.38 24.6 71 7 6 3 2 2 4 2  
6 1.67 1.71 75.8 -1.39 -0.32 22.6 77 7 7 3 5 0 3 1  
7 1.32 1.77 76.3 -0.68 0.10 19.1 70 9 5 3 8 7 2 0  
8 1.35 2.48 86.4 -1.23 -0.54 14.9 86 8 7 9 6 3 3 1  FMN 1030 D
9 1.52 1.77 86.0 -2.14 -0.46 27.1 77 9 10 3 4 2 3 0  FAD 1031 C
10 1.67 2.16 88.9 -1.09 -0.45 18.9 85 8 9 5 7 1 3 0  FAD 1031 B
11 1.94 3.90 89.6 -2.28 -0.42 29.4 74 9 15 2 5 2 6 0  
12 1.60 1.92 93.2 -2.09 -0.40 27.6 75 11 9 3 4 3 4 0  
13 1.70 2.87 93.0 -2.20 -0.48 28.4 73 12 9 2 3 3 3 1  
14 1.79 1.79 98.7 -1.17 -0.45 13.2 88 10 4 9 8 3 2 1  FMN 1030 B
15 1.49 2.17 97.8 -2.22 -0.52 30.5 79 14 10 4 4 3 2 0  
16 1.25 2.47 105.1 -1.66 -0.54 18.9 88 10 7 10 6 1 2 0  
17 1.62 1.64 112.8 -1.93 -0.37 27.6 74 11 14 2 5 2 3 1  
18 1.54 1.96 118.6 -1.64 -0.53 19.0 87 13 8 13 9 2 1 1  FMN 1030 D
19 1.73 1.74 121.6 -1.74 -0.50 21.1 85 12 12 12 9 2 2 1  FMN 1030 D
20 1.63 1.93 129.6 -1.50 -0.48 18.6 85 15 8 13 10 3 2 1  FMN 1030 D
21 1.63 1.64 147.1 -1.50 -0.44 19.2 84 14 10 11 10 2 1 2  FMN 1030 D
22 1.89 1.96 152.0 -2.15 -0.46 26.9 74 16 11 4 6 4 5 1  
23 1.53 1.69 154.6 -2.20 -0.39 29.4 77 14 12 3 9 3 5 0  
24 1.31 1.83 160.4 -1.76 -0.46 18.1 83 14 12 14 12 4 6 0  
25 1.69 2.12 166.3 -1.78 -0.44 22.8 78 15 11 6 8 5 5 0  
26 1.35 1.62 193.9 -1.49 -0.48 16.4 83 18 14 19 12 7 6 1  FMN 1030 C
27 2.34 2.83 194.8 -1.71 -0.39 22.0 76 18 12 8 8 5 7 1  FAD 1031 B
28 1.42 2.37 225.7 -1.53 -0.50 20.3 81 19 18 13 12 7 6 1  FMN 1030 C
29 1.29 2.08 253.4 -1.70 -0.50 18.6 84 29 17 23 14 6 4 1  FMN 1030 C
30 1.48 1.76 263.5 -1.71 -0.48 18.9 85 26 17 22 16 5 4 1  FMN 1030 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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