 |
PDBsum entry 1h7w
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1h7w calculated with MOLE 2.0
|
PDB id
|
|
|
|
1h7w
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
25 pores,
coloured by radius |
 |
30 pores,
coloured by radius
|
30 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.70 |
2.60 |
41.2 |
-0.44 |
0.15 |
20.4 |
67 |
 |
8 |
3 |
0 |
6 |
4 |
2 |
0 |
 |
|
 |
 |
2 |
 |
1.70 |
1.90 |
41.3 |
-2.31 |
-0.39 |
23.3 |
73 |
8 |
1 |
1 |
0 |
2 |
0 |
0 |
|
 |
3 |
 |
2.27 |
2.47 |
41.7 |
-1.97 |
-0.35 |
27.2 |
73 |
4 |
6 |
3 |
3 |
1 |
4 |
0 |
|
 |
4 |
 |
1.74 |
1.86 |
73.7 |
-1.10 |
-0.30 |
15.0 |
85 |
5 |
4 |
8 |
10 |
3 |
3 |
0 |
|
 |
5 |
 |
1.82 |
1.77 |
76.0 |
-2.08 |
-0.38 |
24.6 |
71 |
7 |
6 |
3 |
2 |
2 |
4 |
2 |
|
 |
6 |
 |
1.67 |
1.71 |
75.8 |
-1.39 |
-0.32 |
22.6 |
77 |
7 |
7 |
3 |
5 |
0 |
3 |
1 |
|
 |
7 |
 |
1.32 |
1.77 |
76.3 |
-0.68 |
0.10 |
19.1 |
70 |
9 |
5 |
3 |
8 |
7 |
2 |
0 |
|
 |
8 |
 |
1.35 |
2.48 |
86.4 |
-1.23 |
-0.54 |
14.9 |
86 |
8 |
7 |
9 |
6 |
3 |
3 |
1 |
FMN 1030 D
|
 |
9 |
 |
1.52 |
1.77 |
86.0 |
-2.14 |
-0.46 |
27.1 |
77 |
9 |
10 |
3 |
4 |
2 |
3 |
0 |
FAD 1031 C
|
 |
10 |
 |
1.67 |
2.16 |
88.9 |
-1.09 |
-0.45 |
18.9 |
85 |
8 |
9 |
5 |
7 |
1 |
3 |
0 |
FAD 1031 B
|
 |
11 |
 |
1.94 |
3.90 |
89.6 |
-2.28 |
-0.42 |
29.4 |
74 |
9 |
15 |
2 |
5 |
2 |
6 |
0 |
|
 |
12 |
 |
1.60 |
1.92 |
93.2 |
-2.09 |
-0.40 |
27.6 |
75 |
11 |
9 |
3 |
4 |
3 |
4 |
0 |
|
 |
13 |
 |
1.70 |
2.87 |
93.0 |
-2.20 |
-0.48 |
28.4 |
73 |
12 |
9 |
2 |
3 |
3 |
3 |
1 |
|
 |
14 |
 |
1.79 |
1.79 |
98.7 |
-1.17 |
-0.45 |
13.2 |
88 |
10 |
4 |
9 |
8 |
3 |
2 |
1 |
FMN 1030 B
|
 |
15 |
 |
1.49 |
2.17 |
97.8 |
-2.22 |
-0.52 |
30.5 |
79 |
14 |
10 |
4 |
4 |
3 |
2 |
0 |
|
 |
16 |
 |
1.25 |
2.47 |
105.1 |
-1.66 |
-0.54 |
18.9 |
88 |
10 |
7 |
10 |
6 |
1 |
2 |
0 |
|
 |
17 |
 |
1.62 |
1.64 |
112.8 |
-1.93 |
-0.37 |
27.6 |
74 |
11 |
14 |
2 |
5 |
2 |
3 |
1 |
|
 |
18 |
 |
1.54 |
1.96 |
118.6 |
-1.64 |
-0.53 |
19.0 |
87 |
13 |
8 |
13 |
9 |
2 |
1 |
1 |
FMN 1030 D
|
 |
19 |
 |
1.73 |
1.74 |
121.6 |
-1.74 |
-0.50 |
21.1 |
85 |
12 |
12 |
12 |
9 |
2 |
2 |
1 |
FMN 1030 D
|
 |
20 |
 |
1.63 |
1.93 |
129.6 |
-1.50 |
-0.48 |
18.6 |
85 |
15 |
8 |
13 |
10 |
3 |
2 |
1 |
FMN 1030 D
|
 |
21 |
 |
1.63 |
1.64 |
147.1 |
-1.50 |
-0.44 |
19.2 |
84 |
14 |
10 |
11 |
10 |
2 |
1 |
2 |
FMN 1030 D
|
 |
22 |
 |
1.89 |
1.96 |
152.0 |
-2.15 |
-0.46 |
26.9 |
74 |
16 |
11 |
4 |
6 |
4 |
5 |
1 |
|
 |
23 |
 |
1.53 |
1.69 |
154.6 |
-2.20 |
-0.39 |
29.4 |
77 |
14 |
12 |
3 |
9 |
3 |
5 |
0 |
|
 |
24 |
 |
1.31 |
1.83 |
160.4 |
-1.76 |
-0.46 |
18.1 |
83 |
14 |
12 |
14 |
12 |
4 |
6 |
0 |
|
 |
25 |
 |
1.69 |
2.12 |
166.3 |
-1.78 |
-0.44 |
22.8 |
78 |
15 |
11 |
6 |
8 |
5 |
5 |
0 |
|
 |
26 |
 |
1.35 |
1.62 |
193.9 |
-1.49 |
-0.48 |
16.4 |
83 |
18 |
14 |
19 |
12 |
7 |
6 |
1 |
FMN 1030 C
|
 |
27 |
 |
2.34 |
2.83 |
194.8 |
-1.71 |
-0.39 |
22.0 |
76 |
18 |
12 |
8 |
8 |
5 |
7 |
1 |
FAD 1031 B
|
 |
28 |
 |
1.42 |
2.37 |
225.7 |
-1.53 |
-0.50 |
20.3 |
81 |
19 |
18 |
13 |
12 |
7 |
6 |
1 |
FMN 1030 C
|
 |
29 |
 |
1.29 |
2.08 |
253.4 |
-1.70 |
-0.50 |
18.6 |
84 |
29 |
17 |
23 |
14 |
6 |
4 |
1 |
FMN 1030 C
|
 |
30 |
 |
1.48 |
1.76 |
263.5 |
-1.71 |
-0.48 |
18.9 |
85 |
26 |
17 |
22 |
16 |
5 |
4 |
1 |
FMN 1030 C
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |