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PDBsum entry 1h3e
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Pore analysis for: 1h3e calculated with  MOLE 2.0
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PDB id
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1h3e
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.50 |
2.50 |
37.4 |
-0.40 |
-0.80 |
3.4 |
0 |
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0 |
0 |
0 |
0 |
0 |
0 |
0 |
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G 3 B C 4 B A 5 B G 6 B G 7 B C 47 B i:G U 47 B i:
H G 49 B C 50 B U 51 B G 52 B G 53 B PSU 55 B G
57 B 1MA 58 B A 59 B U 60 B C 61 B C 62 B A 63 B
G 64 B C 65 B
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2 |
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1.49 |
1.52 |
38.8 |
-1.98 |
-0.57 |
23.8 |
85 |
5 |
2 |
1 |
2 |
0 |
0 |
0 |
C 28 B G 29 B G 30 B U 31 B U 33 B A 36 B
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3 |
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1.24 |
1.24 |
50.5 |
0.12 |
0.12 |
10.7 |
76 |
4 |
0 |
0 |
6 |
2 |
2 |
0 |
C 10 B A 27 B
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4 |
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1.26 |
1.26 |
256.2 |
-0.69 |
-0.79 |
7.1 |
82 |
3 |
2 |
0 |
0 |
0 |
0 |
0 |
A 14 B G 15 B C 16 B G 18 B G 19 B C 20 B C 20 B
i:A A 21 B A 22 B G 23 B G 24 B G 25 B G 26 B C
28 B G 29 B G 30 B A 36 B A 37 B A 38 B C 40 B C
41 B G 42 B U 43 B U 44 B G 53 B 5MU 54 B PSU 55
B C 56 B G 57 B 1MA 58 B A 59 B U 60 B C 61 B
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5 |
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1.19 |
1.19 |
291.0 |
-0.78 |
-0.77 |
7.3 |
85 |
2 |
0 |
1 |
1 |
0 |
0 |
0 |
G 3 B C 4 B A 5 B G 6 B G 7 B A 14 B G 15 B C 16
B G 18 B G 19 B C 20 B C 20 B i:A A 21 B A 22 B G
23 B G 24 B G 25 B G 26 B C 28 B G 29 B G 30 B U
31 B C 32 B U 33 B A 36 B A 37 B A 38 B C 40 B C
41 B G 42 B U 43 B U 44 B 5MU 54 B PSU 55 B C 56
B G 57 B 1MA 58 B A 59 B U 60 B C 61 B C 62 B A
63 B G 64 B C 65 B
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6 |
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1.36 |
1.36 |
325.3 |
-1.15 |
-0.70 |
12.6 |
80 |
8 |
2 |
1 |
1 |
0 |
2 |
0 |
G 3 B C 4 B A 5 B G 6 B G 7 B C 10 B A 14 B G 15
B C 16 B G 18 B G 19 B C 20 B C 20 B i:A A 20 B i:
B A 21 B A 22 B G 23 B G 24 B G 25 B G 26 B A 27
B C 28 B G 29 B G 30 B A 36 B A 37 B A 38 B C 40
B C 41 B G 42 B U 43 B U 44 B U 47 B i:D G 53 B
5MU 54 B PSU 55 B C 56 B G 57 B 1MA 58 B A 59 B U
60 B C 61 B C 62 B A 63 B G 64 B C 65 B
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7 |
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1.36 |
1.36 |
333.0 |
-1.36 |
-0.75 |
15.4 |
77 |
5 |
9 |
0 |
1 |
1 |
2 |
0 |
G 3 B C 4 B A 5 B G 6 B G 7 B A 14 B G 15 B C 16
B G 18 B G 19 B C 20 B C 20 B i:A A 20 B i:B A 21
B A 22 B G 23 B G 24 B G 25 B G 26 B C 28 B G 29
B G 30 B A 36 B A 37 B A 38 B C 40 B C 41 B G 42
B U 43 B U 44 B U 47 B i:D 5MU 54 B PSU 55 B C 56
B G 57 B 1MA 58 B A 59 B U 60 B C 61 B C 62 B A
63 B G 64 B C 65 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program