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PDBsum entry 1h3c

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Pore analysis for: 1h3c calculated with MOLE 2.0 PDB id
1h3c
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.30 2.80 32.6 1.32 0.66 3.6 71 1 1 2 8 4 0 1  
2 1.33 2.37 34.5 1.44 0.76 2.9 72 2 1 2 8 4 0 1  
3 1.95 1.96 49.1 -2.09 -0.59 30.0 81 6 6 3 4 1 1 0  
4 1.16 3.02 56.6 1.24 0.61 1.6 70 0 1 2 14 10 2 1  R79 800 C
5 1.17 3.02 63.3 1.37 0.99 3.4 63 1 3 1 15 15 2 1  R79 800 C
6 1.21 1.21 65.7 -0.33 0.50 5.1 69 2 2 5 9 13 0 0  R79 800 A
7 1.35 2.27 72.0 0.04 0.60 9.7 72 5 6 5 8 12 1 0  R79 800 C
8 1.21 3.12 77.4 -0.55 0.27 17.5 70 7 7 0 7 7 2 1  
9 1.21 3.26 79.5 -0.83 0.05 21.3 72 4 6 1 8 6 1 1  
10 1.17 2.41 208.1 -0.86 0.20 14.5 71 13 12 4 12 17 5 1  C8E 700 C R79 800 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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