PDBsum entry 1gzm Go to PDB code:  Pore analysis for: 1gzm calculated with MOLE 2.0 PDB id 1gzm Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.31 68.2 -0.57 0.16 22.3 87 4 1 1 7 1 0 0  PEF 1342 B C8E 1346 B NAG 1 D NAG 2 D BMA 3 D 2 1.25 1.32 68.5 0.78 0.65 15.7 78 2 1 0 10 3 0 0  LDA 1342 A C8E 1347 A C8E 1340 B PEF 1342 B LDA 1343 B C8E 1346 B NAG 1 D NAG 2 D BMA 3 D 3 2.59 4.21 85.0 1.80 0.95 9.7 77 5 0 0 17 7 0 0  PEF 1341 A LDA 1342 A C8E 1345 A C8E 1347 A C8E 1340 B PEF 1342 B LDA 1343 B C8E 1346 B LDA 1348 B NAG 1 D NAG 2 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.