spacer
spacer

PDBsum entry 1gx7

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1gx7 calculated with MOLE 2.0 PDB id
1gx7
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.80 2.26 29.4 0.07 0.20 9.4 80 5 0 2 5 3 0 2  HEC 109 E HEC 112 E
2 1.61 2.84 31.1 -1.04 0.15 18.9 79 5 1 2 3 1 1 2  HEC 109 E
3 1.44 1.52 35.5 -0.02 0.09 16.0 81 5 0 1 4 1 0 3  HEC 110 E HEC 112 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer