PDBsum entry 1gu5

Transcription/DNA

PDB id: 1gu5

Contents

Protein chains

66 a.a. *

DNA/RNA

Waters ×224

* Residue conservation analysis

PDB id:

1gu5

Name:

Transcription/DNA

Title:

Crystal structure of c/ebpbeta bzip homodimer bound to a DNA fragment from the mim-1 promoter

Structure:

Caat/enhancer binding protein beta. Chain: a, b. Fragment: bzip domain, residues 259-336. Synonym: c/ebp beta, nuclear factor nf-il6, transcription factor 5. Engineered: yes. 5'-d( Tp Tp Gp Tp Gp Tp Tp Gp Gp Cp Cp Ap Ap Tp Cp A)-3'. Chain: c. Engineered: yes. 5'-d( Ap Tp Gp Ap Tp Tp Gp Gp Cp Cp Ap Ap Cp Ap Cp A)-3'.

Source:

Homo sapiens. Human. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Organism_taxid: 32630

Biol. unit:

Octamer (from PDB file)

Resolution:

2.10Å R-factor: 0.229 R-free: 0.277

Authors:

T.H.Tahirov,K.Ogata

Key ref:

T.H.Tahirov et al. Structural basis for flexible base recognition by c/ebpbeta. To be published, .

Date:

24-Jan-02 Release date: 26-Jun-03

Protein chains

P17676  (CEBPB_HUMAN) -  CCAAT/enhancer-binding protein beta from Homo sapiens

Seq: 345 a.a.

Struc: 66 a.a.

DNA/RNA chains

T-T-G-T-G-T-T-G-G-C-C-A-A-T-C-A 16 bases

A-T-G-A-T-T-G-G-C-C-A-A-C-A-C-A 16 bases