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PDBsum entry 1gnc

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Pore analysis for: 1gnc calculated with MOLE 2.0 PDB id
1gnc
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.79 2.79 29.2 1.22 0.28 8.6 77 0 2 4 7 1 0 1  
2 1.59 1.58 31.4 0.70 0.01 5.2 80 1 0 5 7 2 0 0  
3 1.37 1.55 33.0 1.47 0.41 4.7 77 1 1 2 7 2 0 2  
4 1.16 3.44 43.7 2.28 0.68 0.9 67 0 0 3 12 3 0 0  
5 1.08 1.08 45.0 2.27 0.66 1.1 64 0 0 1 13 3 0 0  
6 1.33 2.30 47.4 -0.77 0.02 17.3 76 2 2 2 5 2 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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