spacer
spacer

PDBsum entry 1gj2

Go to PDB code: 
Top Page dna_rna ligands metals tunnels links
Tunnel analysis for: 1gj2 calculated with MOLE 2.0 PDB id
1gj2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.03 6.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  4 DA A,5 DA A,6 DG A,24 DT C,25 DG C,26 DG C
2 1.75 9.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  4 DA A,5 DA A,24 DT C,25 DG C,26 DG C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer