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PDBsum entry 1g2v

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1g2v calculated with MOLE 2.0 PDB id
1g2v
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.36 2.39 28.1 -2.79 -0.84 26.3 88 4 3 6 0 0 0 0  
2 2.65 2.73 69.5 -1.55 -0.55 14.7 83 6 3 7 2 0 3 0  TTP 3502 B
3 2.62 2.74 71.4 -2.02 -0.61 22.5 80 7 5 7 2 0 2 0  TTP 3502 B
4 1.52 1.53 73.2 -2.42 -0.67 29.4 80 6 10 5 5 0 0 0  
5 1.87 1.87 78.1 -2.14 -0.81 9.4 81 3 4 12 1 1 4 0  
6 1.21 3.38 87.8 -1.01 -0.16 21.1 82 7 6 4 12 2 1 0  TTP 3506 D
7 1.22 3.61 101.4 -1.14 -0.21 20.1 80 10 6 5 13 2 1 0  TTP 3504 C
8 1.49 2.12 100.9 -2.15 -0.70 17.8 87 7 6 12 1 1 3 0  TTP 3500 A
9 1.83 1.83 111.1 -1.96 -0.67 12.1 77 7 3 11 4 1 7 0  TTP 3502 B
10 1.24 3.65 122.8 -1.44 -0.36 23.5 81 8 12 7 14 2 1 0  TTP 3504 C
11 1.49 1.59 161.5 -2.11 -0.62 18.5 85 13 8 17 6 0 6 0  TTP 3510 F TTP 3512 G
12 1.43 1.41 162.9 -2.19 -0.67 22.6 84 15 12 17 3 1 4 0  TTP 3510 F TTP 3512 G

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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