 |
PDBsum entry 1g2v
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1g2v calculated with MOLE 2.0
|
PDB id
|
|
|
|
1g2v
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
14 pores,
coloured by radius |
 |
12 pores,
coloured by radius
|
12 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.36 |
2.39 |
28.1 |
-2.79 |
-0.84 |
26.3 |
88 |
 |
4 |
3 |
6 |
0 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
2.65 |
2.73 |
69.5 |
-1.55 |
-0.55 |
14.7 |
83 |
6 |
3 |
7 |
2 |
0 |
3 |
0 |
TTP 3502 B
|
 |
3 |
 |
2.62 |
2.74 |
71.4 |
-2.02 |
-0.61 |
22.5 |
80 |
7 |
5 |
7 |
2 |
0 |
2 |
0 |
TTP 3502 B
|
 |
4 |
 |
1.52 |
1.53 |
73.2 |
-2.42 |
-0.67 |
29.4 |
80 |
6 |
10 |
5 |
5 |
0 |
0 |
0 |
|
 |
5 |
 |
1.87 |
1.87 |
78.1 |
-2.14 |
-0.81 |
9.4 |
81 |
3 |
4 |
12 |
1 |
1 |
4 |
0 |
|
 |
6 |
 |
1.21 |
3.38 |
87.8 |
-1.01 |
-0.16 |
21.1 |
82 |
7 |
6 |
4 |
12 |
2 |
1 |
0 |
TTP 3506 D
|
 |
7 |
 |
1.22 |
3.61 |
101.4 |
-1.14 |
-0.21 |
20.1 |
80 |
10 |
6 |
5 |
13 |
2 |
1 |
0 |
TTP 3504 C
|
 |
8 |
 |
1.49 |
2.12 |
100.9 |
-2.15 |
-0.70 |
17.8 |
87 |
7 |
6 |
12 |
1 |
1 |
3 |
0 |
TTP 3500 A
|
 |
9 |
 |
1.83 |
1.83 |
111.1 |
-1.96 |
-0.67 |
12.1 |
77 |
7 |
3 |
11 |
4 |
1 |
7 |
0 |
TTP 3502 B
|
 |
10 |
 |
1.24 |
3.65 |
122.8 |
-1.44 |
-0.36 |
23.5 |
81 |
8 |
12 |
7 |
14 |
2 |
1 |
0 |
TTP 3504 C
|
 |
11 |
 |
1.49 |
1.59 |
161.5 |
-2.11 |
-0.62 |
18.5 |
85 |
13 |
8 |
17 |
6 |
0 |
6 |
0 |
TTP 3510 F TTP 3512 G
|
 |
12 |
 |
1.43 |
1.41 |
162.9 |
-2.19 |
-0.67 |
22.6 |
84 |
15 |
12 |
17 |
3 |
1 |
4 |
0 |
TTP 3510 F TTP 3512 G
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |