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PDBsum entry 1g0u

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Pore analysis for: 1g0u calculated with MOLE 2.0 PDB id
1g0u
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.15 1.33 33.9 -0.58 -0.09 2.6 85 1 0 5 2 3 1 0  
2 1.78 1.85 36.0 -3.00 -0.63 37.7 83 5 7 3 0 1 0 0  
3 1.60 2.79 63.9 -1.27 -0.30 18.9 75 5 8 5 6 4 4 0  
4 2.13 2.36 79.5 -2.21 -0.46 28.4 85 10 5 5 5 3 1 0  
5 2.35 2.96 80.0 -1.79 -0.36 21.1 78 10 5 6 3 6 1 0  
6 2.10 2.63 81.2 -2.15 -0.41 24.6 86 10 6 6 4 4 0 0  
7 1.77 4.24 81.7 -1.55 -0.39 20.6 82 9 5 8 4 4 1 0  
8 1.90 1.90 83.0 -1.67 -0.49 23.7 82 7 9 7 7 3 2 0  
9 2.02 3.89 84.6 -2.63 -0.59 30.4 81 12 8 6 1 2 2 0  
10 2.15 2.62 94.3 -2.62 -0.40 29.0 79 12 6 6 6 7 1 0  
11 2.12 2.55 99.7 -2.46 -0.33 27.9 81 12 7 9 5 8 0 0  
12 1.54 1.77 106.7 -2.31 -0.38 27.2 79 15 9 7 5 8 1 0  
13 1.54 1.86 108.3 -2.41 -0.35 29.1 79 17 8 8 6 8 2 0  
14 1.86 2.03 119.2 -1.45 -0.23 18.8 78 13 4 9 9 8 3 0  
15 1.51 1.85 118.8 -2.74 -0.47 31.9 82 20 10 8 4 6 1 0  
16 1.87 2.02 137.2 -2.05 -0.34 26.8 77 19 8 10 10 10 3 0  
17 2.21 2.38 154.1 -1.99 -0.39 21.5 82 16 5 12 4 7 1 0  
18 1.74 1.74 164.3 -2.15 -0.36 27.0 76 25 9 10 10 11 4 0  
19 2.09 2.26 161.4 -1.70 -0.31 21.1 84 17 7 12 8 6 3 1  
20 2.32 2.73 160.7 -1.94 -0.41 19.7 85 16 5 13 4 5 1 0  
21 2.08 2.63 170.5 -2.33 -0.38 24.8 83 18 7 12 4 8 0 0  
22 2.15 3.81 175.2 -2.26 -0.46 22.3 86 17 7 14 4 7 0 0  
23 2.15 2.37 176.6 -2.44 -0.43 25.4 85 19 7 15 5 7 1 0  
24 2.15 2.62 181.8 -2.47 -0.38 26.8 81 21 7 13 5 9 2 0  
25 1.59 1.79 182.3 -2.15 -0.41 23.0 80 19 7 13 5 8 2 0  
26 1.15 1.92 192.1 -1.46 -0.12 16.0 80 14 9 16 8 12 4 0  
27 2.09 2.24 191.4 -2.02 -0.36 22.7 85 18 9 14 8 7 2 1  
28 2.08 2.42 192.8 -2.11 -0.37 24.4 85 20 8 15 9 7 3 1  
29 1.20 1.97 215.0 -1.64 -0.17 17.7 80 16 10 20 9 11 4 0  
30 1.69 2.11 229.2 -2.30 -0.38 24.3 82 23 11 18 7 10 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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