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PDBsum entry 1fvg

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Tunnel analysis for: 1fvg calculated with MOLE 2.0 PDB id
1fvg
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.14 1.14 24.2 -0.84 -0.41 11.9 87 3 0 3 2 2 0 0  MSE 70 A MSE 145 A
2 1.13 1.14 25.0 -0.78 -0.37 11.9 88 3 0 3 3 2 0 0  MSE 70 A MSE 145 A
3 1.24 1.57 16.2 -0.26 -0.33 9.0 83 1 1 1 2 2 0 0  MSE 65 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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