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PDBsum entry 1frp

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1frp calculated with MOLE 2.0 PDB id
1frp
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.39 18.6 0.45 -0.22 2.4 80 0 0 1 6 1 0 0  AMP 338 A
2 1.19 1.39 19.4 0.23 0.09 5.9 78 2 0 1 6 2 0 0  AMP 338 A
3 1.17 1.50 18.5 0.00 0.04 15.0 83 1 2 1 6 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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