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PDBsum entry 1fpp

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1fpp calculated with MOLE 2.0 PDB id
1fpp
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 2.02 29.3 -0.76 0.76 9.9 59 3 1 2 1 8 0 2  FPP 440 B
2 1.18 2.01 43.6 -1.48 0.44 15.0 63 2 4 3 1 10 0 1  FPP 440 B
3 1.43 1.43 17.9 -0.61 -0.34 7.8 84 1 0 1 2 0 2 0  
4 1.15 1.34 19.6 -1.36 0.22 21.0 62 3 2 0 1 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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