PDBsum entry 1fp3

Pore analysis for: 1fp3 calculated with

MOLE 2.0

PDB id

1fp3

Pores calculated on whole structure

Pores calculated excluding ligands

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9 pores, coloured by radius

9 pores, coloured by radius

9 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.48

1.76

25.4

-0.76

-0.26

12.9

73

3

2

2

2

2

0

1

2

2.79

6.17

35.3

-0.87

0.03

15.6

71

4

2

4

3

6

1

0

3

1.45

1.65

49.0

-1.70

-0.47

17.2

82

5

2

5

2

1

1

1

4

1.28

4.21

63.7

-1.47

0.27

22.8

70

10

6

1

6

8

0

1

5

1.26

2.53

64.4

-2.89

-0.61

38.5

83

8

6

2

2

0

1

0

6

1.24

4.16

66.0

-1.87

0.20

29.2

67

10

6

1

4

11

0

1

7

1.27

4.22

79.4

-1.85

-0.15

29.1

76

11

8

3

6

6

1

1

8

1.23

4.17

96.9

-1.73

0.08

27.5

70

11

8

2

6

11

1

1

9

1.24

1.21

105.2

-1.66

-0.23

22.8

81

9

10

4

8

2

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.