PDBsum entry 1foo Go to PDB code:  Tunnel analysis for: 1foo calculated with MOLE 2.0 PDB id 1foo Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.19 36.3 0.17 -0.13 8.3 77 1 1 2 5 3 1 1  HEM 500 A ACT 1860 A 2 1.18 1.47 37.9 0.22 -0.11 7.3 71 1 1 2 5 4 1 1  HEM 500 B ARG 2700 B ACT 2860 B 3 1.21 1.21 42.3 -0.94 -0.18 13.6 76 5 3 4 4 5 1 0  HEM 500 A ARG 1700 A GOL 1880 A 4 1.19 1.42 44.7 -1.03 -0.13 15.1 77 5 3 4 4 4 1 0  HEM 500 B ARG 2700 B GOL 2880 B 5 1.20 1.21 46.3 -0.90 -0.17 14.3 72 4 1 1 4 4 2 0  HEM 500 A ARG 1700 A GOL 1880 A 6 1.14 1.42 56.6 -0.40 0.00 11.2 71 5 2 2 7 5 4 1  HEM 500 B ARG 2700 B GOL 2880 B NO 2910 B 7 1.36 1.38 17.0 -0.10 -0.21 6.9 88 0 1 3 6 0 0 0   8 1.20 1.59 26.2 1.70 0.37 5.1 77 2 0 0 9 0 0 0   9 1.20 1.59 26.3 1.62 0.35 5.3 77 2 0 0 9 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.