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PDBsum entry 1fkp

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1fkp calculated with MOLE 2.0 PDB id
1fkp
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.70 57.2 -1.19 -0.48 8.8 81 4 1 4 2 1 2 0  
2 1.20 1.27 68.7 -1.53 -0.30 18.6 73 7 5 3 5 3 1 0  
3 1.73 1.99 113.6 -1.77 -0.35 28.9 82 11 6 3 5 1 3 0  
4 1.74 4.21 124.5 -1.93 -0.38 25.6 79 15 9 5 6 2 3 0  
5 1.62 1.78 130.6 -2.19 -0.32 23.2 75 9 8 6 4 7 3 0  
6 1.84 2.02 142.3 -2.00 -0.39 24.0 77 13 11 5 5 5 4 0  
7 1.83 1.99 143.8 -1.97 -0.44 25.9 78 15 11 2 5 5 5 0  
8 1.84 2.14 180.0 -2.15 -0.45 28.4 78 16 13 7 6 3 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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