PDBsum entry 1fif Go to PDB code:  Tunnel analysis for: 1fif calculated with MOLE 2.0 PDB id 1fif Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.45 15.6 -0.83 -0.05 17.7 81 5 1 1 3 2 0 0   2 1.29 1.44 17.3 -0.82 0.06 17.8 77 5 0 1 2 1 1 0   3 1.38 1.57 17.5 -0.64 0.03 14.1 79 4 0 1 2 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.