PDBsum entry 1fay Go to PDB code:  Pore analysis for: 1fay calculated with MOLE 2.0 PDB id 1fay Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.67 2.84 48.4 -1.88 -0.66 11.6 83 3 2 10 2 0 4 0   2 1.23 1.62 59.2 -1.53 -0.26 14.2 78 4 2 7 3 3 4 0  AMG 406 G 3 1.57 2.89 86.3 -1.87 -0.48 16.1 81 6 2 11 1 2 4 0  AMG 400 A AMG 407 H 4 1.28 1.56 87.4 -1.16 -0.46 11.7 85 3 4 13 9 4 2 0  AMG 404 E 5 2.46 2.60 104.1 -2.02 -0.58 12.7 82 4 3 18 3 4 6 0  AMG 403 D AMG 404 E 6 2.19 2.18 116.6 -1.88 -0.58 11.6 82 4 3 17 4 5 6 0  AMG 403 D AMG 404 E 7 1.19 1.41 140.2 -1.10 -0.49 11.9 87 7 5 15 8 3 2 0  NAG 1 M NAG 2 M 8 1.20 1.42 169.7 -0.73 -0.37 10.2 89 7 6 15 13 4 0 0  AMG 404 E NAG 1 M NAG 2 M 9 1.21 1.44 194.1 -1.31 -0.37 13.1 83 9 6 18 9 6 4 0  AMG 403 D AMG 404 E NAG 1 M NAG 2 M 10 1.22 1.27 199.0 -1.28 -0.48 10.6 87 9 6 22 8 4 4 0  AMG 404 E NAG 1 M NAG 2 M Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.