PDBsum entry 1f8s Go to PDB code:  Tunnel analysis for: 1f8s calculated with MOLE 2.0 PDB id 1f8s Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.22 61.7 -1.35 -0.32 17.2 86 8 4 6 7 2 0 0   2 1.26 1.43 61.8 -1.45 -0.37 14.8 84 9 2 10 5 4 0 0  BE2 1545 H BE2 1546 H 3 1.18 1.24 69.8 -1.16 -0.28 15.7 84 8 2 8 6 4 0 0  BE2 1545 D BE2 1546 D 4 1.20 1.26 113.7 -1.61 -0.33 19.9 82 11 8 8 9 8 1 0  FAD 523 D BE2 1544 D BE2 1545 D 5 1.18 1.24 117.6 -1.51 -0.28 20.9 82 13 8 9 10 7 1 0  FAD 524 E BE2 1544 E BE2 1545 E 6 1.18 1.24 121.2 -1.69 -0.34 21.2 82 12 9 7 9 7 1 0  FAD 524 E BE2 1544 E BE2 1545 E 7 1.23 1.22 125.1 -1.22 -0.22 14.8 82 10 6 10 11 11 1 0  FAD 526 G BE2 1544 G BE2 1545 G 8 1.21 1.23 134.3 -1.53 -0.24 22.4 79 15 11 8 10 12 1 0  FAD 526 G BE2 1544 G BE2 1545 G 9 1.33 1.34 29.7 -0.68 -0.13 10.9 79 3 2 2 2 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.