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PDBsum entry 1f3d
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Tunnel analysis for: 1f3d calculated with  MOLE 2.0
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PDB id
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1f3d
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.10 |
1.31 |
16.0 |
0.01 |
-0.44 |
4.0 |
83 |
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0 |
1 |
3 |
3 |
1 |
1 |
0 |
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2 |
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1.09 |
1.30 |
20.6 |
-0.41 |
-0.63 |
5.3 |
82 |
1 |
1 |
3 |
2 |
1 |
1 |
0 |
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3 |
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2.66 |
2.72 |
15.7 |
-0.60 |
-0.54 |
7.6 |
87 |
0 |
1 |
1 |
1 |
1 |
1 |
0 |
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4 |
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1.84 |
1.96 |
24.2 |
-0.62 |
-0.43 |
9.5 |
79 |
1 |
2 |
2 |
2 |
1 |
2 |
0 |
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5 |
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1.29 |
2.18 |
16.8 |
0.14 |
-0.43 |
1.9 |
102 |
0 |
0 |
5 |
2 |
0 |
0 |
0 |
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6 |
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1.24 |
2.15 |
16.9 |
0.42 |
-0.33 |
1.8 |
100 |
0 |
0 |
4 |
2 |
0 |
0 |
0 |
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7 |
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1.24 |
2.12 |
17.7 |
0.35 |
-0.35 |
1.9 |
95 |
0 |
0 |
4 |
2 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program