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PDBsum entry 1f3b

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1f3b calculated with MOLE 2.0 PDB id
1f3b
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.16 2.72 27.1 0.06 -0.03 8.6 84 2 2 2 6 2 1 0  GBX 224 B
2 2.18 2.98 27.9 -1.49 -0.35 18.6 81 5 1 2 4 0 1 0  GBX 223 A
3 2.77 2.77 30.6 -1.45 -0.29 21.0 79 4 1 2 3 0 1 0  GBX 224 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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