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PDBsum entry 1ejm

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Pore analysis for: 1ejm calculated with MOLE 2.0 PDB id
1ejm
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.52 34.0 -1.30 -0.20 17.2 80 4 1 4 2 5 0 0  SO4 3607 B SO4 3609 B
2 1.37 1.54 37.6 -1.82 -0.63 12.9 94 3 1 9 3 0 0 0  
3 1.14 1.14 49.3 -1.21 -0.40 12.1 82 4 1 7 3 5 0 0  SO4 3607 B SO4 3609 B
4 1.24 1.35 49.4 -1.45 -0.64 9.2 96 2 0 11 3 0 0 1  
5 1.36 1.54 70.8 -1.55 -0.68 13.5 95 2 4 11 2 1 0 0  
6 1.20 1.47 128.8 -1.50 -0.60 10.8 89 7 1 14 2 4 0 1  SO4 3607 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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