spacer
spacer

PDBsum entry 1ejh

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1ejh calculated with MOLE 2.0 PDB id
1ejh
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 2.57 38.5 -2.83 -0.70 33.9 80 6 4 1 1 0 0 0  M7G 1001 A
2 1.46 2.75 44.1 -2.58 -0.53 29.2 75 4 6 1 2 2 0 0  M7G 1001 A M7G 1003 C
3 1.69 1.78 35.4 -0.83 -0.34 15.2 73 2 3 2 3 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer