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PDBsum entry 1egd
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Pore analysis for: 1egd calculated with  MOLE 2.0
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PDB id
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1egd
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.61 |
1.64 |
25.3 |
-0.96 |
-0.50 |
13.6 |
86 |
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4 |
1 |
3 |
3 |
1 |
0 |
0 |
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FAD 399 B
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2 |
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1.77 |
1.77 |
33.0 |
-0.37 |
-0.08 |
8.4 |
78 |
3 |
0 |
1 |
6 |
5 |
1 |
0 |
FAD 399 C
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3 |
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1.54 |
1.54 |
37.4 |
-0.84 |
-0.05 |
6.7 |
78 |
3 |
0 |
3 |
4 |
4 |
1 |
0 |
FAD 399 D
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4 |
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1.53 |
1.61 |
69.1 |
-1.18 |
-0.19 |
15.3 |
77 |
8 |
1 |
3 |
5 |
4 |
0 |
0 |
FAD 399 C
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5 |
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1.52 |
1.68 |
70.5 |
-0.03 |
-0.10 |
6.7 |
81 |
4 |
2 |
2 |
9 |
5 |
1 |
0 |
FAD 399 A
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6 |
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1.57 |
1.57 |
92.9 |
-0.53 |
-0.10 |
12.4 |
80 |
9 |
1 |
3 |
9 |
6 |
1 |
0 |
FAD 399 B
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7 |
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1.49 |
1.59 |
110.4 |
-0.20 |
0.05 |
11.9 |
78 |
9 |
2 |
3 |
11 |
7 |
0 |
0 |
FAD 399 A
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8 |
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1.54 |
1.65 |
153.2 |
-0.33 |
-0.08 |
11.2 |
77 |
9 |
4 |
2 |
9 |
6 |
3 |
0 |
FAD 399 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program