PDBsum entry 1ef3 Go to PDB code:  Pore analysis for: 1ef3 calculated with MOLE 2.0 PDB id 1ef3 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.73 1.73 25.5 -1.95 -0.76 17.5 92 2 1 5 1 0 0 0   2 2.87 2.87 28.4 -1.78 -0.79 5.5 91 1 2 10 3 0 0 0   3 2.06 2.14 29.2 -1.47 -0.69 4.1 83 1 0 7 4 0 0 0   4 1.69 1.93 30.0 -1.71 -0.77 11.8 87 2 1 6 2 0 0 0   5 1.95 2.16 33.9 -0.11 -0.38 7.2 79 3 1 2 6 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.