PDBsum entry 1e8c Go to PDB code:  Tunnel analysis for: 1e8c calculated with MOLE 2.0 PDB id 1e8c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 1.49 37.8 -1.34 -0.18 20.6 78 6 3 3 3 3 1 1  MSE 397 A UAG 1498 A API 1499 A 2 1.42 2.84 53.5 -1.28 -0.16 19.0 78 7 5 2 3 3 1 1  MSE 397 A UAG 1498 A API 1499 A 3 1.45 1.50 55.5 -0.51 -0.11 13.1 81 6 2 3 8 3 1 1  MSE 342 A MSE 397 A UAG 1498 A API 1499 A 4 1.44 1.50 58.2 -1.62 -0.23 24.0 77 9 6 3 3 3 2 2  MSE 397 A UAG 1498 A API 1499 A 5 1.44 1.50 64.9 -1.49 -0.12 22.0 79 10 5 4 5 3 1 2  MSE 397 A UAG 1498 A API 1499 A 6 1.18 1.18 18.3 0.23 -0.39 7.6 77 0 2 0 5 1 0 0  MSE 431 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.