spacer
spacer

PDBsum entry 1e86

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 1e86 calculated with MOLE 2.0 PDB id
1e86
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.33 1.61 17.1 0.38 0.51 8.3 64 2 0 1 2 4 0 2  HEC 128 A
2 1.32 1.63 30.6 -0.23 0.34 14.1 64 3 1 2 1 4 0 1  HEC 128 A CMO 130 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer