spacer
spacer

PDBsum entry 1e7h

Go to PDB code: 
Top Page protein ligands pores links
Pore analysis for: 1e7h calculated with MOLE 2.0 PDB id
1e7h
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.53 25.4 0.56 0.40 10.0 81 2 2 3 5 1 1 0  PLM 1003 A PLM 1004 A
2 1.80 2.99 44.3 1.12 0.46 9.8 76 3 2 1 10 2 0 0  PLM 1004 A
3 1.25 1.55 62.0 0.06 0.07 14.0 83 4 4 5 12 2 1 0  PLM 1003 A PLM 1006 A
4 1.17 1.32 74.4 -1.80 -0.31 24.9 78 6 6 2 5 3 0 0  PLM 1001 A
5 1.34 2.54 80.6 0.00 0.09 11.3 76 5 4 5 13 5 1 2  PLM 1002 A
6 1.54 1.86 85.8 -1.59 -0.20 26.6 80 13 7 5 11 3 1 0  PLM 1006 A
7 1.25 1.57 89.0 -0.11 0.17 16.4 77 9 6 6 19 5 2 0  PLM 1002 A PLM 1003 A
8 1.39 1.81 92.5 0.12 0.21 16.1 76 11 4 6 21 6 1 0  PLM 1002 A PLM 1006 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer