PDBsum entry 1e3e Go to PDB code:  Tunnel analysis for: 1e3e calculated with MOLE 2.0 PDB id 1e3e Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.11 2.56 42.5 2.10 0.63 4.1 92 2 1 0 13 0 1 0   2 1.17 1.99 77.2 0.56 0.22 11.3 87 5 4 1 15 2 2 0   3 1.15 1.43 85.4 0.39 0.20 12.8 87 6 5 1 15 1 2 0  NAI 377 A 4 1.47 1.71 19.7 -1.16 -0.41 17.8 88 3 1 1 1 0 0 0   5 1.38 1.78 21.6 -1.38 -0.52 22.2 87 3 3 1 2 0 0 0   6 1.30 1.56 16.4 0.83 0.57 6.5 75 2 0 1 6 3 0 0   7 1.21 1.91 18.4 1.91 0.51 4.5 73 1 1 1 4 1 0 0   8 1.11 1.49 21.2 1.87 0.51 5.6 70 2 1 0 6 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.