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PDBsum entry 1e2j
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Tunnel analysis for: 1e2j calculated with  MOLE 2.0
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PDB id
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1e2j
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
1.28 |
30.4 |
0.36 |
0.03 |
6.6 |
74 |
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1 |
1 |
0 |
8 |
1 |
4 |
0 |
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2 |
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1.14 |
1.21 |
57.5 |
-0.54 |
-0.22 |
11.7 |
78 |
3 |
2 |
1 |
9 |
1 |
6 |
0 |
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3 |
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1.37 |
1.37 |
31.3 |
-1.54 |
0.16 |
21.9 |
83 |
6 |
1 |
2 |
4 |
3 |
0 |
0 |
SO4 400 A THM 500 A
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4 |
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1.71 |
1.74 |
19.8 |
0.25 |
0.80 |
10.6 |
84 |
2 |
0 |
1 |
6 |
2 |
0 |
0 |
THM 500 B
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5 |
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1.34 |
1.34 |
20.5 |
-0.31 |
0.60 |
11.0 |
81 |
2 |
0 |
1 |
6 |
2 |
1 |
0 |
THM 500 B
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6 |
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1.53 |
1.58 |
15.0 |
0.02 |
-0.37 |
1.9 |
98 |
0 |
0 |
3 |
6 |
1 |
0 |
0 |
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7 |
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1.34 |
1.56 |
15.5 |
-0.08 |
-0.38 |
1.9 |
104 |
0 |
0 |
3 |
5 |
0 |
0 |
0 |
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8 |
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1.63 |
1.63 |
18.8 |
0.27 |
-0.43 |
2.9 |
103 |
0 |
1 |
2 |
5 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program