spacer
spacer

PDBsum entry 1e1h

Go to PDB code: 
Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1e1h calculated with MOLE 2.0 PDB id
1e1h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.36 1.36 34.9 -0.85 0.02 10.2 85 2 1 5 3 3 0 0  
2 1.38 1.38 38.8 -1.35 -0.05 14.3 81 2 3 4 3 3 2 0  
3 1.38 1.37 45.3 -1.38 -0.06 13.8 84 3 2 5 3 3 1 0  
4 1.15 2.32 18.0 0.27 -0.14 3.3 86 0 1 4 6 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer