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PDBsum entry 1dxt

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1dxt calculated with MOLE 2.0 PDB id
1dxt
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 2.17 35.2 1.60 0.75 7.0 66 3 0 0 13 3 0 0  HEM 142 C
2 1.23 2.21 47.9 0.87 0.63 12.5 69 5 1 0 13 4 1 0  HEM 142 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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