PDBsum entry 1dw2 Go to PDB code:  Tunnel analysis for: 1dw2 calculated with MOLE 2.0 PDB id 1dw2 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 2.51 23.4 1.54 0.61 8.5 53 1 1 0 4 2 0 2  HEM 113 B 2 1.29 1.54 27.0 1.02 0.84 11.3 59 2 0 0 5 3 0 0  HEM 113 B NO 114 B 3 1.29 1.56 27.5 0.78 0.57 14.2 66 3 2 0 5 4 0 0  HEM 113 B 4 1.25 1.41 55.5 0.04 0.09 6.6 74 2 0 3 9 3 2 1  HEM 113 B NO 114 B 5 1.20 1.44 67.0 -0.29 0.04 13.2 76 5 3 3 10 3 1 1  HEM 113 B NO 114 B 6 1.11 2.09 20.8 1.58 0.91 11.7 60 3 0 0 6 2 0 2  HEM 113 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.