PDBsum entry 1dv3 Go to PDB code:  Pore analysis for: 1dv3 calculated with MOLE 2.0 PDB id 1dv3 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.88 2.47 33.3 -0.18 0.58 15.9 76 4 0 3 5 5 0 0  BCL 2002 R BCL 2001 S BCL 2003 S BPH 2005 S 2 2.82 4.30 33.7 0.66 0.82 12.0 73 4 0 1 8 5 0 0  BCL 2002 R BCL 2004 R BCL 2001 S BCL 2003 S BPH 2005 S 3 1.24 1.29 34.4 -2.27 -0.57 24.7 87 4 4 5 3 0 2 0   4 1.21 2.22 40.3 -1.89 -0.43 25.4 79 5 9 0 2 0 4 0   5 1.51 1.64 65.0 0.24 0.20 11.6 70 4 6 0 11 7 2 0  U10 2009 R BCL 2001 S BCL 2003 S BPH 2005 S 6 1.20 1.22 67.5 -0.55 0.04 19.8 74 3 6 2 10 7 2 0  U10 2009 R BCL 2001 S BCL 2003 S BPH 2005 S 7 1.78 2.69 31.5 -0.22 0.55 15.9 77 4 0 3 4 5 0 0  BCL 1001 L BCL 1002 L BCL 1003 M BPH 1005 M LDA 1013 M 8 2.63 4.16 34.2 0.61 0.80 12.3 73 4 0 1 8 5 0 0  BCL 1001 L BCL 1002 L BCL 1003 M BCL 1004 M BPH 1005 M LDA 1013 M 9 1.50 1.50 64.6 0.21 0.19 12.1 70 4 6 0 11 7 2 0  BCL 1001 L U10 1009 L BCL 1003 M BPH 1005 M 10 1.46 1.60 69.6 0.35 0.20 12.7 71 3 5 1 14 7 2 0  BCL 1001 L U10 1009 L BCL 1003 M BPH 1005 M Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.